Network#
- class Network(ideal_bond_length, force_constants=None)#
Bases:
object- __init__(ideal_bond_length, force_constants=None)#
Methods
__init__(ideal_bond_length[, force_constants])add_angled_triplet(triplet, angle)add_connection(connection)add_connections_from(connections)add_point(point, name)add_stiff_triplet(triplet)add_stiff_triplets_from(triplets)Compute the average distance between connected beads.
Compute the forces on each bead based on the force function.
compute_repulsive_ignore()Compute the average distance between connected beads.
net_force_magnitude()scale(factor)Scale all bead positions by a given factor.
step(dt)- average_connection_length()#
Compute the average distance between connected beads.
- compute_forces()#
Compute the forces on each bead based on the force function.
- distances()#
Compute the average distance between connected beads.
- scale(factor)#
Scale all bead positions by a given factor.